Publications of Microbiology Graduate Students; in bold
2023:
Kenney, A. D., Zani, A., Kawahara, J., Eddy, A. C., Wang, X. L., Mahesh, K. C., Lu, M., Thomas, J., Kohlmeier, J. E., Suthar, M. S., Hemann, E. A., Li, J., Peeples, M. E., Hall-Stoodley, L., Forero, A., Cai, C., Ma, J., & Yount, J. S. (2023). Interferon-induced transmembrane protein 3 (IFITM3) limits lethality of SARS-CoV-2 in mice. EMBO reports, e56660. Advance online publication. https://doi.org/10.15252/embr.202256660
2022:
Danis-Wlodarczyk, K. M., Cai, A., Chen, A., Gittrich, M. R., Sullivan, M. B., Wozniak, D. J., & Abedon, S. T. (2021). Friends or Foes? Rapid Determination of Dissimilar Colistin and Ciprofloxacin Antagonism of Pseudomonas aeruginosa Phages. Pharmaceuticals (Basel, Switzerland), 14(11), 1162. https://doi.org/10.3390/ph14111162
Paoli, L., Ruscheweyh, H. J., Forneris, C. C., Hubrich, F., Kautsar, S., Bhushan, A., Lotti, A., Clayssen, Q., Salazar, G., Milanese, A., Carlström, C. I., Papadopoulou, C., Gehrig, D., Karasikov, M., Mustafa, H., Larralde, M., Carroll, L. M., Sánchez, P., Zayed, A. A., Cronin, D. R., … Sunagawa, S. (2022). Biosynthetic potential of the global ocean microbiome. Nature, 607(7917), 111–118. https://doi.org/10.1038/s41586-022-04862-3
Zhang, Y., Lu, M., Mahesh, K. C., Kim, E., Shamseldin, M. M., Ye, C., Dravid, P., Chamblee, M., Park, J. G., Hall, J. M., Trivedi, S., Chaiwatpongsakorn, S., Kenny, A. D., Murthy, S. S., Sharma, H., Liang, X., Yount, J. S., Kapoor, A., Martinez-Sobrido, L., Dubey, P., … Li, J. (2022). A highly efficacious live attenuated mumps virus-based SARS-CoV-2 vaccine candidate expressing a six-proline stabilized prefusion spike. Proceedings of the National Academy of Sciences of the United States of America, 119(33), e2201616119. https://doi.org/10.1073/pnas.2201616119
Fullen, A. R., Gutierrez-Ferman, J. L., Yount, K. S., Love, C. F., Choi, H. G., Vargas, M. A., Raju, D., Corps, K. N., Howell, P. L., Dubey, P., & Deora, R. (2022). Bps polysaccharide of Bordetella pertussis resists antimicrobial peptides by functioning as a dual surface shield and decoy and converts Escherichia coli into a respiratory pathogen. PLoS pathogens, 18(8), e1010764. https://doi.org/10.1371/journal.ppat.1010764
Zayed, A. A., Wainaina, J. M., Dominguez-Huerta, G., Pelletier, E., Guo, J., Mohssen, M., Tian, F., Pratama, A. A., Bolduc, B., Zablocki, O., Cronin, D., Solden, L., Delage, E., Alberti, A., Aury, J. M., Carradec, Q., da Silva, C., Labadie, K., Poulain, J., Ruscheweyh, H. J., … Wincker, P. (2022). Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome. Science (New York, N.Y.), 376(6589), 156–162. https://doi.org/10.1126/science.abm5847
Ray, S. C., & Rappleye, C. A. (2022). Mac1-Dependent Copper Sensing Promotes Histoplasma Adaptation to the Phagosome during Adaptive Immunity. mBio, 13(2), e0377321. https://doi.org/10.1128/mbio.03773-21
Wilson, A., & Ruiz, N. (2022). The transmembrane α-helix of LptC participates in LPS extraction by the LptB2 FGC transporter. Molecular microbiology, 118(1-2), 61–76. https://doi.org/10.1111/mmi.14952
Wilson, A., Iniguez, C., & Ruiz, N. (2022). Use of Mutagenesis and Functional Screens to Characterize Essential Genes Involved in Lipopolysaccharide Transport. Methods in molecular biology (Clifton, N.J.), 2548, 3–19. https://doi.org/10.1007/978-1-0716-2581-1_1
Shukla, S., Huston, R. H., Cox, B. D., Satoskar, A. R., & Narayan, R. J. (2022). Transdermal delivery via medical device technologies. Expert opinion on drug delivery, 10.1080/17425247.2022.2135503. Advance online publication. https://doi.org/10.1080/17425247.2022.2135503
Volpedo, G., Bhattacharya, P., Gannavaram, S., Pacheco-Fernandez, T., Oljuskin, T., Dey, R., Satoskar, A. R., & Nakhasi, H. L. (2022). The History of Live Attenuated Centrin Gene-Deleted Leishmania Vaccine Candidates. Pathogens (Basel, Switzerland), 11(4), 431. https://doi.org/10.3390/pathogens11040431
Volpedo, G., Pacheco-Fernandez, T., Holcomb, E. A., Zhang, W. W., Lypaczewski, P., Cox, B., Fultz, R., Mishan, C., Verma, C., Huston, R. H., Wharton, A. R., Dey, R., Karmakar, S., Oghumu, S., Hamano, S., Gannavaram, S., Nakhasi, H. L., Matlashewski, G., & Satoskar, A. R. (2022). Centrin-deficient Leishmania mexicana confers protection against New World cutaneous leishmaniasis. NPJ vaccines, 7(1), 32. https://doi.org/10.1038/s41541-022-00449-1
Staats, A., Burback, P. W., Schwieters, A., Li, D., Sullivan, A., Horswill, A. R., & Stoodley, P. (2022). Rapid Aggregation of Staphylococcus aureus in Synovial Fluid Is Influenced by Synovial Fluid Concentration, Viscosity, and Fluid Dynamics, with Evidence of Polymer Bridging. mBio, 13(2), e0023622. https://doi.org/10.1128/mbio.00236-22
Leggett, A., Li, D. W., Sindeldecker, D., Staats, A., Rigel, N., Bruschweiler-Li, L., Brüschweiler, R., & Stoodley, P. (2022). Cadaverine Is a Switch in the Lysine Degradation Pathway in Pseudomonas aeruginosa Biofilm Identified by Untargeted Metabolomics. Frontiers in cellular and infection microbiology, 12, 833269. https://doi.org/10.3389/fcimb.2022.833269
Takagi, J., Aoki, K., Turner, B. S., Lamont, S., Lehoux, S., Kavanaugh, N., Gulati, M., Valle Arevalo, A., Lawrence, T. J., Kim, C. Y., Bakshi, B., Ishihara, M., Nobile, C. J., Cummings, R. D., Wozniak, D. J., Tiemeyer, M., Hevey, R., & Ribbeck, K. (2022). Mucin O-glycans are natural inhibitors of Candida albicans pathogenicity. Nature chemical biology, 18(7), 762–773. https://doi.org/10.1038/s41589-022-01035-1
Rana, P., Gloag, E. S., & Wozniak, D. J. (2022). Standardized In vitro Assays to Visualize and Quantify Interactions between Human Neutrophils and Staphylococcus aureus Biofilms. Journal of visualized experiments : JoVE, (184), 10.3791/63773. https://doi.org/10.3791/63773